Illumina MiSeq data report
Tue Sep 17 09:00:01 EDT 2019

This report details the progress in archiving sequencing data and processing gene therapy sequencing runs.

Sequencing runs that failed are highlighted in red while development runs are highlighted in yellow.
Runs annotated as gene therapy trials report the status of their integration site analyses.

Runs with missing sample data report admin comments when available.

Column details:
data archived (yes/no) sequencing data has been stored in both its primary and secondary archive locations.
The data sizes following this flag denote the data sizes in the data output directory, primary archive and secondary archive.
A dash for the output directory data size means that this data has been removed to conserve space.
Notable size differences between archives are noted in red.
run registered (yes/no) sequencing run event has been registered in the sequencing registry.
samples registered (yes/no) meta data for samples within a run have been registered in the sequencing registry.
intSites called (yes/no) integration site analyses have been performed (gene therapy runs only)
admin administrator notes for runs where the sample meta data has not been archived in the registry.



Status Run id data archived run registered samples registered intSites called links admin
production/successful180105_M03249_0307_000000000-BJTJCyes (-, 1.4 GB, 1.4 GB) yesno- -Meagan Rubel, MAR_Cameroon_V4_Run1_1518.
production/successful180118_M03249_0308_000000000-BGFVCyes (-, 2.7 GB, 2.7 GB) yesno- -Meagan Rubel, Cameroon V4 Run 1, Attempt 2. First 192 Cameroon gut microbiome samples.
production/successful180124_M03249_0309_000000000-BCHL7yes (-, 4.2 GB, 4.2 GB) yesno- -Meagan Rubel, CM_V4_R2.
production/successful180126_M03249_0310_000000000-BM26Fyes (-, 0.0 GB, 0.0 GB) yesyes- -Lyanna Kessler, Baby Virome Shotgun.
production/successful180130_M03249_0311_000000000-BLDNCyes (-, 0.1 GB, 0.1 GB) yesno- -Meagan Rubel, CM_V4_R3.
production/successful180130_M03249_0312_000000000-BL49Myes (-, 4.9 GB, 4.9 GB) yesno- -Meagan Rubel, CM_V4_R3.
production/successful180131_M00281_0317_000000000-BLFD2yes (-, 1.4 GB, 1.4 GB) yesno- -Shantan Reddy; Paul Bates; Zika CRISPR Screen
development/successful180201_M03249_0313_000000000-B6V99yes (-, 1.8 GB, 1.8 GB) yesno- -Shantan Reddy; iGuideSeq; Sample Run Set1
development/successful180205_M03249_0314_000000000-BM8GWyes (-, 2.1 GB, 2.1 GB) yesno- -Shantan Reddy; iGuide; Sample Run Set2 negative strand
development/successful180212_M03249_0315_000000000-BLLNKyes (-, 6.0 GB, 6.0 GB) yesno- -Shantan Reddy; iGuide; Sample Run Set2 negative strand
development/successful180214_M03249_0316_000000000-BLDRHyes (-, 2.2 GB, 2.2 GB) yesno- -Shantan Reddy; iGuide; Sample Run Set3 negative strand
development/successful180215_M00281_0322_000000000-BM6NMyes (-, 0.2 GB, 0.2 GB) yesno- -Shantan Reddy; Paul Bates; Zika CRISPR Screen rerun
production/successful180216_M03249_0317_000000000-BMWY8yes (-, 0.1 GB, 0.1 GB) yesno- -Jake Leiby; piggyBac, adenovirus vectors, Patrick Sinn,pig model
production/successful180220_M00281_0323_000000000-BMWYVyes (-, 0.2 GB, 3.1 GB) yesyes- -Jake Leiby; piggyBac, adenovirus vectors, Patrick Sinn,pig model
production/successful180220_M03249_0318_000000000-BMHHPyes (-, 2.3 GB, 2.3 GB) yesyes- -John Gregg; Scott Sherrill-Mix; HIV Provirus; p108, p111, p159, p241.
production/successful180222_M03249_0319_000000000-BMHW4yes (-, 3.7 GB, 3.7 GB) yesyesyes -John Gregg; David Williams; SCIDn2 GeneTherapy p00007, p00003
production/successful180227_M03249_0320_000000000-BNDMWyes (-, 4.4 GB, 4.4 GB) yesyesyes -Shantan Reddy; David Williams; SCIDn2 GeneTherapy p00009, p00008, p00005
production/successful180301_M03249_0321_000000000-BNDFGyes (-, 1.8 GB, 1.8 GB) yesno- -Shantan Reddy; Paul Bates; Zika CRISPR Screen rerun2
production/successful180305_M00281_0327_000000000-BMK22yes (-, 1.3 GB, 1.3 GB) yesyes- -Vincent Wu; Mike Betts; HIV Provirus; Custom Primers; E2S, CAGN, JAGN.
production/successful180305_M03249_0322_000000000-BMCRNyes (-, 4.4 GB, 4.4 GB) yesyesyes -Shantan Reddy; Sung-Yun Pai and David Williams; pWAS00006
production/successful180308_M03249_0323_000000000-BN9MTyes (-, 5.0 GB, 4.9 GB) yesyesyes -Shantan Reddy; Sung-Yun Pai and David Williams; pWAS00006, pWAS00005, pWAS00004
production/successful180314_M03249_0324_000000000-BNL7Myes (-, 5.9 GB, 5.9 GB) yesyesyes -John Gregg; David Williams; CGD GeneTherapy pU103
production/successful180316_M03249_0325_000000000-BNBPMyes (-, 5.8 GB, 5.8 GB) yesyesyes -John Gregg; David Williams; CGD GeneTherapy pN102, pB101
production/successful180319_M03249_0326_000000000-BNL7Ryes (-, 4.2 GB, 4.2 GB) yesyesyes -Shantan Reddy; Leo Wang and David Williams; CGD GeneTherapy pU103, pN104, pN102
production/successful180322_M03249_0327_000000000-BNRJFyes (-, 3.8 GB, 3.8 GB) yesyesyes -Shantan Reddy; David Williams; SCIDn2 GeneTherapy p00003, p00008
production/successful180323_M00281_0335_000000000-BNWHFyes (-, 4.8 GB, 4.8 GB) yesyes- -Jake Leiby; jsl_Placenta_16S_2
production/successful180327_M00281_0336_000000000-BNWH5yes (-, 2.9 GB, 2.9 GB) yesyesyes -John Gregg; Stephanie Cherqui; CYS GeneTherapy
production/successful180328_M03249_0328_000000000-BNL6Kyes (-, 3.7 GB, 3.7 GB) yesyesyes -Shantan Reddy; Carl June; CART19 p04409-01, p04409-02
production/successful180406_M00281_0341_000000000-BPPBYyes (-, 2.6 GB, 2.6 GB) yesno- -John Gregg; Blankson; GeneTherapy p169, pES24, pCP31
production/successful180406_M03249_0329_000000000-BPR62yes (-, 7.8 GB, 7.7 GB) yesyes- -Jacob Leiby, VK_V4_jsl
production/successful180411_M03249_0330_000000000-BPR5Ryes (-, 3.1 GB, 3.1 GB) yesnono -Shantan Reddy; Gijsbers; sinMLV (outsourced library from Belgium)
production/successful180416_M03249_0331_000000000-BPV27yes (-, 5.0 GB, 5.0 GB) yesnoyes -John Gregg; Catherine Terrell; SCGT GeneTherapy pSCGT002, pSCGT004
production/successful180427_M03249_0332_000000000-BR7V8yes (-, 3.5 GB, 3.5 GB) yesyesno -CXCR4 run -- (!) incorrect primers used, indigenous viruses may be found. Need to repeat.
production/successful180501_M03249_0333_000000000-G1JBVyes (-, 0.8 GB, 0.8 GB) yesyesyes -John Gregg; Donald Kohn, David Williams; CGD Cryo Test, pN105, pN104
production/successful180508_M03249_0334_000000000-G1V9Fyes (-, 1.0 GB, 1.0 GB) yesyesyes -John Gregg; Donald Kohn, David Williams; CGD GeneTherapy Cryo Test, pN105, pN104
production/successful180510_M03249_0335_000000000-BT7FJyes (-, 5.0 GB, 5.0 GB) yesyesyes -John Gregg; David Williams; SCIDn2 GeneTherapy; p00009, p00007, p00008
production/successful180517_M00281_0353_000000000-BT95Nyes (-, 4.8 GB, 4.8 GB) yesno- -Jake Lieby - COMBO_V1V2
production/successful180517_M03249_0336_000000000-BT6H8yes (-, 3.6 GB, 3.6 GB) yesno- -Shantan - iGuide Sample Run Set4 and Set5 negative strand
production/successful180521_M03249_0337_000000000-BT8J3yes (-, 5.4 GB, 5.4 GB) yesyesyes -WAS Sample Set10, pWAS_UK05, pWAS_UK04, pWAS_UK11
production/successful180524_M03249_0338_000000000-BT7GLyes (-, 5.1 GB, 5.1 GB) yesyesyes -WAS pWAS_UK05 and pWAS_UK02
production/successful180607_M03249_0339_000000000-D3KYNyes (-, 0.5 GB, 0.5 GB) yesno- -Jacob Leiby - Spark Pilot, 5p1 primers
production/successful180614_M03249_0340_000000000-B6T5Dyes (-, 3.8 GB, 3.8 GB) yesno- -Shantan - target assay
production/successful180619_M03249_0341_000000000-BTP2Gyes (-, 3.0 GB, 3.0 GB) yesno- -Blankson HIV samples, LentiU3 and CPRU5 primers
production/successful180620_M03249_0342_000000000-G254Wyes (-, 1.3 GB, 1.3 GB) yesno- -Partials_6_20_18
production/successful180627_M00281_0364_000000000-D352Kyes (-, 0.4 GB, 0.4 GB) yesno- -Spark2; AAV vector; 3p1v2 primers
production/successful180627_M03249_0343_000000000-BWDLFyes (-, 5.4 GB, 5.4 GB) yesyesyes -SCIDn2 p00009, p00008, p00005
production/successful180629_M03249_0344_000000000-BWCP2yes (-, 6.1 GB, 6.1 GB) yesno- -Jake Lieby - MICU_ITS2
production/successful180703_M03249_0345_000000000-BNBRGyes (-, 0.0 GB, 0.0 GB) yesno- -Jake Lieby - MICU_16S
production/successful180706_M03249_0346_000000000-BWJYPyes (-, 3.2 GB, 3.2 GB) yesyesyes -CART19 Sample Set17 p03712-06
production/successful180719_M03249_0347_000000000-G278Gyes (-, 0.3 GB, 0.3 GB) yesyes- -pSINSCID_UK01
production/successful180723_M03249_0348_000000000-BWJYYyes (-, 3.2 GB, 3.2 GB) yesnono -Vincent Wu, Mike Betts, HIV Provirus Intsites: E2S, CAGN, JAGN, JLRL
production/successful180725_M03249_0349_000000000-BY6FGyes (-, 6.4 GB, 6.4 GB) yesno- -Jake Lieby - MICU_16S_3
production/successful180727_M03249_0350_000000000-BWDN5yes (-, 4.0 GB, 4.0 GB) yesyesyes -aiCART Sample Set3 p04511-309, p04511-316
development/successful180730_M03249_0351_000000000-BWK23yes (-, 9.4 GB, 9.4 GB) yesno- -Spark3 set1 5p and 3p_primers
production/successful180801_M03249_0352_000000000-BY86Nyes (-, 3.2 GB, 3.2 GB) yesyesno -pSINSCID_UK01
production/successful180803_M03249_0353_000000000-BY7RCyes (-, 3.6 GB, 3.6 GB) yesyes- -sinSCID GTSP 2041-2048
production/successful180815_M03249_0354_000000000-C28RMyes (-, 5.1 GB, 5.1 GB) yesnoyes -CGD pB101, pN104, pU103
production/successful180817_M03249_0355_000000000-C29GKyes (-, 3.3 GB, 3.3 GB) yesnono -sinMLV outsourced library 2 from Belgium
development/successful180820_M03249_0356_000000000-C2874yes (-, 2.4 GB, 2.4 GB) yesno- -Guanxiang WGS - infant stool
development/successful180822_M03249_0357_000000000-C29M4yes (-, 5.6 GB, 5.6 GB) yesno- -iGuide; Sample Run Set6 negative strand
production/successful180824_M03249_0358_000000000-C29H2yes (-, 4.5 GB, 4.5 GB) yesyesyes -UCSD Cystinosis
production/successful180829_M03249_0359_000000000-C29FRyes (-, 4.2 GB, 4.2 GB) yesno- -sinSCID p00009
development/successful180831_M03249_0360_000000000-C3CG8yes (-, 4.3 GB, 4.3 GB) yesno- -iGuide sample Run Set7 negative strand
production/successful180905_M03249_0361_000000000-C2J4Byes (-, 5.5 GB, 5.5 GB) yesnoyes -CGD GTSP 2065-2078
development/successful180907_M03249_0362_000000000-BT6MDyes (-, 3.1 GB, 3.1 GB) yesno- -Jake Lieby - Collman_16S
production/successful180910_M03249_0363_000000000-C32BVyes (-, 5.4 GB, 5.4 GB) yesyesyes -WAS pWAS00002, pWAS00003, pWAS00005
production/successful180912_M03249_0364_000000000-C3C5Lyes (-, 3.7 GB, 3.7 GB) yesnono -Vincent Wu, HIV Provirus Intsites, U3 and U5, JAGN, GMCB, CAGN, EZS
development/successful180920_M03249_0365_000000000-C3CH4yes (-, 7.3 GB, 7.3 GB) yesno- -Jake Leiby, Dog_Hemo; AAV vector
production/successful180924_M03249_0366_000000000-C3GMNyes (-, 4.2 GB, 4.2 GB) yesnoyes -Hayley Raymond, WAS - Boston, GTSP2128-2139
production/successful180928_M03249_0367_000000000-C4TGYyes (-, 5.7 GB, 5.7 GB) yesnoyes -Shantan Reddy, WAS - Boston, pWAS00002, pWAS00004, pWAS00005, pWAS00006
production/successful181001_M03249_0368_000000000-G2NR4yes (-, 0.9 GB, 0.9 GB) yesnoyes -Hayley Raymond, CGD, GTSP2093-2099
production/successful181005_M03249_0369_000000000-C4THPyes (-, 4.5 GB, 4.5 GB) yesnoyes -Hayley Raymond, CYS - final samples before IND
production/successful181010_M03249_0370_000000000-C3J8Vyes (-, 5.0 GB, 5.0 GB) yesnoyes -Shantan Reddy, WAS - France, pFR01, pFR03, pFR05
production/successful181018_M03249_0371_000000000-BJHBCyes (-, 4.6 GB, 4.6 GB) yesnoyes -SCIDn1: pP2, pP7, pP9, pP10
production/successful181022_M03249_0372_000000000-D4PV6yes (-, 0.4 GB, 0.4 GB) yesno- -Jake, CGD shotgun test
production/successful181024_M03249_0373_000000000-C3HV4yes (-, 2.3 GB, 2.3 GB) yesnono -Vincent Wu; Mike Betts - HIV integration
production/successful181026_M03249_0374_000000000-C4NK2yes (-, 5.1 GB, 5.1 GB) yesnoyes -Hayley, CGD / SCIDn2
production/successful181030_M03249_0375_000000000-BNL22yes (-, 5.4 GB, 5.4 GB) yesno- -Shantan, iGuide, set8
production/successful181101_M03249_0376_000000000-C276Wyes (-, 2.3 GB, 2.3 GB) yesno- -Lenka Dohnalova run
production/successful181105_M03249_0377_000000000-BJJRGyes (-, 3.0 GB, 3.0 GB) yesno- -Oxana Dmitrieva - TRF_cohousedGF
production/failed181107_M03249_0378_000000000-C4TKDyes (-, 0.1 GB, 0.1 GB) yesnono -Jake, CGD GeneTherapy; N104, B101, N102, U107, Failed run
production/successful181109_M00281_0421_000000000-C599Fyes (-, 3.1 GB, 3.1 GB) yesnoyes -Jake, CGD GeneTherapy; N104, B101, N102, U107
production/successful181109_M03249_0379_000000000-C3GN3yes (-, 5.1 GB, 5.1 GB) yesnoyes -Hayley, SCGT
production/successful181112_M03249_0380_000000000-C5B4Wyes (-, 5.3 GB, 5.3 GB) yesnoyes -Hayley, Mixed trials
production/successful181116_M03249_0381_000000000-BNVJRyes (-, 0.3 GB, 0.3 GB) yesno- -Lenka, TRF1
production/successful181120_M03249_0382_000000000-C5V2Dyes (-, 4.6 GB, 4.6 GB) yesnoyes -Shantan Reddy; Carl June; intsites; CART19 GeneTherapy Sample Set18
production/successful181121_M03543_0129_000000000-C66HRyes (-, 4.0 GB, 4.0 GB) yesnoyes -Shantan Reddy; Carl June; intsites; CART19 GeneTherapy Sample Set18
production/successful181126_M03249_0383_000000000-C683Wyes (-, 4.3 GB, 4.3 GB) yesnoyes -Jake Leiby; Six; intsites; bthal
production/successful181130_M03249_0384_000000000-C59CVyes (-, 4.1 GB, 4.1 GB) yesnoyes -Shantan Reddy; Marina Cavazzana; intsites; SCIDn2 GeneTherapy
production/successful181201_M03249_0385_000000000-BT9T8yes (-, 5.6 GB, 5.6 GB) yesno- -Lenka - TRF2
production/successful181203_M03249_0386_000000000-BTBDYyes (-, 2.3 GB, 2.3 GB) yesno- -Oxana, no description
production/successful181205_M03249_0387_000000000-C66HCyes (-, 3.0 GB, 3.0 GB) yesnono -Hayley, HIV_Odoherty
production/successful181207_M03249_0388_000000000-C7K26yes (-, 5.6 GB, 5.6 GB) yesno- -Shantan, iGuide Sample Run Set9 negative strand
production/successful181211_M03249_0389_000000000-C5VHTyes (-, 5.8 GB, 5.8 GB) yesno- -Lenka, TRF3_mice4_6
production/successful181213_M00281_0435_000000000-G3BCWyes (-, 0.9 GB, 0.9 GB) yesno- -Shantan, iGuide Sample Run Set10 negative strand
production/successful181214_M03249_0390_000000000-C5P5Myes (-, 5.9 GB, 5.9 GB) yesno- -Lenka, TRF1Rep_mice1_5
production/successful181217_M03249_0391_000000000-C7K7Cyes (-, 4.3 GB, 4.3 GB) yesnoyes -Hayley, intsite_CXCR4_Penn_Lacey
production/successful181221_M03249_0392_000000000-C7KFMyes (-, 4.9 GB, 4.9 GB) yesnono -Jake, WAS set, patients 3 4 5
production/successful190107_M03249_0393_000000000-C5RKHyes (4.4 GB, 4.7 GB, 4.7 GB) yesno- -Lenka
production/successful190108_M05588_0153_000000000-C7K9Dyes (-, 3.7 GB, 3.7 GB) yesnono -Hayley; Jones HIV
production/successful190110_M03249_0394_000000000-C5GKRyes (4.2 GB, 4.2 GB, 4.2 GB) yesnoyes -Shantan; Boston WAS
production/successful190111_M03249_0395_000000000-C5RL4yes (5.8 GB, 5.8 GB, 5.7 GB) yesno- -Lenka
production/successful190114_M03249_0396_000000000-C7KPMyes (3.6 GB, 3.6 GB, 3.5 GB) yesno- -Jake; Belgian ext lib
production/successful190116_M03249_0397_000000000-C7KD5yes (2.6 GB, 2.6 GB, 2.6 GB) yesnono -Hayely; Jones HIV
production/successful190118_M03249_0398_000000000-C68YByes (4.6 GB, 4.6 GB, 4.6 GB) yesnoyes -Shantan; Bostn WAS
production/successful190123_M03249_0399_000000000-C6NT5yes (3.6 GB, 3.6 GB, 3.6 GB) yesno- -Belgian lib2
production/successful190125_M03249_0400_000000000-C5N8Kyes (7.3 GB, 7.3 GB, 7.3 GB) yesno- -Oxana run
production/successful190127_M03249_0401_000000000-C8MGJyes (4.9 GB, 4.9 GB, 4.9 GB) yesnoyes -Boston SCIDn2 p00008, p00009, p00007
production/successful190129_M03249_0402_000000000-BJG4Cyes (0.1 GB, 0.1 GB, 0.1 GB) yesno- -Laura Su TCR run
production/successful190131_M03249_0403_000000000-C8N9Dyes (0.2 GB, 0.2 GB, 0.2 GB) yesnono -Vincent HIV run
production/successful190201_M00281_0451_000000000-C8N97yes (-, 3.9 GB, 3.9 GB) yesnono -Vincent HIV run
production/successful190204_M00281_0452_000000000-C8N9Byes (-, 1.1 GB, 1.1 GB) yesno- -iGuide run
production/successful190205_M04734_0148_000000000-C8MG3yes (-, 2.6 GB, 2.6 GB) yesnoyes -Boston SCIDn2 p00003, p00008
production/successful190214_M03249_0404_000000000-C9BCLyes (4.7 GB, 4.7 GB, 4.7 GB) yesnoyes -CART19 / SCGT
production/successful190221_M03249_0405_000000000-CB77Yyes (5.1 GB, 5.1 GB, 5.1 GB) yesnoyes -Boston SCIDn2 p00005, p00007, p00009
production/successful190226_M03249_0406_000000000-CB77Ryes (4.7 GB, 4.7 GB, 4.7 GB) yesnoyes -CXCR4
production/successful190305_M03249_0407_000000000-D5VY8yes (0.2 GB, 0.2 GB, 0.2 GB) yesno- -Marisol dilutions
production/successful190308_M03249_0408_000000000-CB6YPyes (5.3 GB, 5.3 GB, 5.3 GB) yesno- -Kayla 16S
production/successful190309_M00281_0461_000000000-CB6RGyes (-, 3.5 GB, 3.5 GB) yesnono -Hayley Siliciano HIV
production/successful190311_M03249_0409_000000000-C8HL8yes (4.2 GB, 4.2 GB, 4.2 GB) yesnoyes -Lyanna Boston SCID2
production/successful190313_M03249_0410_000000000-CB72Yyes (0.0 GB, 0.0 GB, 0.0 GB) yesno- -Shantan iGuide set 12 neg strand
production/failed190313_M05588_0174_000000000-CB6HByes (-, 1.0 GB, 1.0 GB) yesno- -Jake iGuid (failed)
production/successful190315_M03249_0411_000000000-CC56Myes (5.3 GB, 5.3 GB, 5.3 GB) yesno- -Shantan iGuide set 12
production/successful190315_M05588_0175_000000000-CCBDDyes (-, 2.2 GB, 2.2 GB) yesno- -Jake iGuide PACE
production/successful190320_M03249_0412_000000000-CC6F2yes (3.2 GB, 3.2 GB, 3.2 GB) yesnono -Bar HIV
production/successful190322_M03249_0413_000000000-C7W9Yyes (5.2 GB, 5.2 GB, 5.2 GB) yesno- -Lenka run
production/successful190325_M03249_0414_000000000-C9F24yes (6.1 GB, 6.1 GB, 6.1 GB) yesno- -Lenka run
production/failed190327_M03249_0415_000000000-C8T2Wyes (0.9 GB, 0.9 GB, 0.9 GB) yesnono -Lyanna SCGT (failed)
production/successful190329_M03249_0416_000000000-CC3FDyes (3.4 GB, 3.4 GB, 3.4 GB) yesnoyes -Lyanna SCGT
production/failed190401_M00281_0473_000000000-CD2FLyes (-, 1.1 GB, 1.1 GB) yesnono -Hayley CYS (failed)
production/failed190406_M00281_0477_000000000-CCNHTyes (-, 1.1 GB, 1.1 GB) yesnono -Hayley CYS (failed)
production/successful190408_M03249_0418_000000000-CD3DKyes (-, 1.7 GB, 1.7 GB) yesno- -PhiX diagnostic
production/successful190410_M03249_0419_000000000-CD2B7yes (-, 3.6 GB, 3.6 GB) yesnoyes -Shantan CYS
production/successful190412_M00281_0480_000000000-CGWM8yes (-, 2.5 GB, 2.5 GB) yesno- -KaylaBarekat NSAID
production/successful190412_M03249_0420_000000000-CGBVGyes (-, 4.3 GB, 4.3 GB) yesno- -Shantan iGuide set 13
production/successful190415_M03249_0421_000000000-CCB8Vyes (-, 2.2 GB, 2.2 GB) yesnoyes -Jake CGD
production/successful190417_M03249_0422_000000000-CDPM2yes (-, 4.8 GB, 4.8 GB) yesnono -Lyanna CCXR4
production/successful190419_M03249_0423_000000000-CC6FHyes (-, 4.6 GB, 4.6 GB) yesnoyes -Lyanna CGD
/successful190423_M00281_0483_000000000-CCY9Fyes (-, 3.9 GB, 3.9 GB) yesnoyes -Hayley CYS and CGD
production/successful190423_M03249_0424_000000000-CD2K3yes (-, 4.9 GB, 4.9 GB) yesnoyes -Hayley CYS
/successful190425_M03249_0425_000000000-CGVYPyes (-, 4.6 GB, 4.6 GB) yesnono -Jake CGD
/successful190429_M03249_0426_000000000-CGWNWyes (-, 5.2 GB, 5.2 GB) yesno- -Shantan iGuide O Rourke
/successful190501_M03249_0427_000000000-CGMRMyes (4.6 GB, 4.6 GB, 4.6 GB) yesnoyes -Lyanna BostonSCIDn2
/successful190503_M03249_0428_000000000-C9CPByes (0.3 GB, 0.3 GB, 0.3 GB) yesno- -Lenka DO mice
/successful190505_M03249_0429_000000000-C9F55yes (5.2 GB, 5.2 GB, 5.2 GB) yesno- -Lenka DO mice 2
/successful190507_M04734_0166_000000000-CGPG8yes (-, 4.0 GB, 4.0 GB) yesnoyes -Lyanna Boston WAS
/successful190508_M03249_0430_000000000-CGFV8yes (0.0 GB, 0.0 GB, 0.0 GB) yesno- -Kayla 16S
/successful190511_M03249_0431_000000000-CG2M7yes (4.1 GB, 4.1 GB, 4.1 GB) yesnoyes -Hayley SCID1
/successful190514_M03249_0432_000000000-D66DRyes (0.3 GB, 0.3 GB, 0.3 GB) yesno- -Aoife AD_HUPCSF 16S
/successful190515_M03249_0433_000000000-G3W95yes (1.3 GB, 1.3 GB, 1.3 GB) yesnoyes -Lyanna Boston WAS
/successful190517_M03249_0434_000000000-CFPFPyes (5.0 GB, 5.0 GB, 5.0 GB) yesnoyes -Hayley Boston SCID2
/successful190521_M03249_0435_000000000-D669Ryes (0.2 GB, 0.2 GB, 0.2 GB) yesno- -Kayla
/successful190522_M03249_0436_000000000-CGVYRyes (4.4 GB, 6.6 GB, 6.6 GB) yesnoyes -Lyanna CART
/successful190525_M00281_0495_000000000-CGY8Fyes (-, 4.4 GB, 4.4 GB) yesnoyes -CART19
/successful190529_M03249_0437_000000000-CGLJ3yes (4.9 GB, 4.9 GB, 4.9 GB) yesno- -Kayla
/successful190531_M03249_0438_000000000-CGW2Jyes (0.2 GB, 0.2 GB, 0.2 GB) yesno- -Shantan iGuide (fail)
/successful190603_M05588_0204_000000000-CFPFLyes (-, 4.1 GB, 4.1 GB) yesno- -Shantan iGuide
/successful190605_M05588_0205_000000000-CGY99yes (-, 3.8 GB, 3.8 GB) yesnoyes -CART PSMA
/successful190612_M03249_0439_000000000-CH689yes (5.1 GB, 5.1 GB, 5.1 GB) yesno- -iGuide
/successful190620_M03249_0440_000000000-CH569yes (0.1 GB, 0.1 GB, 0.1 GB) yesnono -iGuide
/successful190624_M03249_0441_000000000-CH27Yyes (3.8 GB, 3.8 GB, 3.8 GB) yesnoyes -CART19
/successful190705_M03249_0442_000000000-C9CDVyes (5.6 GB, 5.6 GB, 5.6 GB) yesno- -Lenka
/successful190710_M03249_0443_000000000-CH4NLyes (5.2 GB, 5.2 GB, 5.2 GB) yesno- -iGuide
/successful190722_M03249_0444_000000000-CJGGLyes (3.7 GB, 3.7 GB, 3.7 GB) yesno- -iGuide
/successful190727_M03249_0445_000000000-C9DV7yes (0.1 GB, 0.1 GB, 0.1 GB) yesno- -
/successful190812_M03249_0001_000000000-CJHFByes (4.4 GB, 4.4 GB, 4.4 GB) yesnoyes -CART19_CLL
/successful190814_M03249_0002_000000000-CJHG7yes (0.3 GB, 5.0 GB, 5.0 GB) yesnoyes -CART19_CLL
/successful190816_M03249_0003_000000000-CJHFKyes (0.2 GB, 4.4 GB, 4.4 GB) yesnoyes -CART19_CLL
/successful190819_M03249_0004_000000000-CJHGTyes (0.2 GB, 3.5 GB, 3.5 GB) yesnono -CYS
production/failed190822_M03249_0005_000000000-CLHM7yes (0.2 GB, 4.5 GB, 4.5 GB) yesnono -Wrong seq primer used.
/successful190830_M03249_0006_000000000-CFRCHyes (3.0 GB, 3.0 GB, 3.0 GB) yesno- -
/successful190903_M03249_0007_000000000-CH493yes (2.5 GB, 2.5 GB, 2.4 GB) yesnono -
/successful190905_M03249_0008_000000000-CLHMCyes (4.2 GB, 4.2 GB, 4.2 GB) yesnono -
/successful190910_M03249_0009_000000000-CLHJ9yes (4.0 GB, 4.0 GB, 4.0 GB) yesnoyes -
/successful190912_M03249_0010_000000000-CKNGKyes (2.3 GB, 2.3 GB, 2.3 GB) yesnono -
/successful190914_M03249_0011_000000000-CLGF5yes (4.0 GB, 4.0 GB, 4.0 GB) yesnono -
production/successful190916_M03249_0012_000000000-G4BBTyes (0.0 GB, 0.0 GB, 0.0 GB) nono- -
register_run.py --file=/media/sequencing/Illumina/190916_M03249_0012_000000000-G4BBT --date=2019-09-16 --type=Illumina-MiSeq --kit='Nextera XT' --comment='investigator: Aoife Doto | experiment: MarisolRivellaLinus | description: M50 Linus Dog AAV'